Table 1.
Upper Limit of 95% Confidence Interval for False-Positive Rate
| Fold | False-positive rate (%) |
| β-propeller | 2.1 |
| PLP-dependent transferases | 2.5 |
| α/β-hydrolase | 2.8 |
| SAM-methyltransferases | 3.0 |
| Zn-β-lactamases | 3.3 |
| Periplasmic-binding II | 3.4 |
| Ferredoxin-like | 3.7 |
| ATP-pyrophosphatases | 4.3 |
| TIM-barrel | 5.3 |
| P-loop NTPases | 5.6 |
| RNase H-like | 5.8 |
| NR-ligand binding | 6.1 |
| Rossmann-like | 6.2 |
| Protein kinases | 6.3 |
| Flavodoxin-like | 7.6 |
| Rossmann-fold | 9.6 |
| ATP-grasp | 17.1 |
| Class II aaRS and biotin synthetases | 23.9 |
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↵Abbreviated SCOP 1.35-fold names.
