Table 1.
Description of Markers Used in this Study
| Locus | Description | Primer sequences | Ho | Phys. assign. | Reference | |
| Genes | ||||||
| Blood groups | ||||||
| EAA | erythrocyte antigen A | 50 | Bailey et al. (1979) | |||
| EAD | erythrocyte antigen D | 37.5 | Sandberg (1973) | |||
| EAQ | erythrocyte antigen Q | 37.5 | Bowling et al. (1985) | |||
| Microsatellite | ||||||
| IGF2 | insulin-like | GGAGCACAGAACATGAAAAC | 87.5 | 12q13 | H. Ellegren (unpubl.) | |
| growth factor 2 | AAATTTAATTGGCACAAACC | Raudsepp et al. (1997) | ||||
| PCR-RFLPs | ||||||
| MC1R | melanocyte-stimulating hormone receptor 1 | GATGGATCCTTCTGGGCTCCCTCAACTC | 37.5 | 3p12 | Marklund et al. (1996b) | |
| GTAGTAGGCGATGAAGAGCGTGCT | T. Raudsepp (unpubl.) | |||||
| KIT | mast cell growth factor receptor | ATTTATTCCAACTTAGCGAACTGCAGC | 25 | 3q21 | Marklund et al. (1996b) | |
| TCAGACATCTTCGTGGACAAGCAGAGG | ||||||
| Lear et al. (1997) | ||||||
| Proteins | ||||||
| A1BG | α-1-B glycoprotein | 37.5 | Juneja et al. (1987) | |||
| ALB | albumin | 50 | 3q14.3 | Andersson and Sandberg (1982) Godard et al. (1998) | ||
| CA | carbonic anhydrase | 37.5 | Sandberg et al. (1968) | |||
| ES | carboxylesterase | 50 | Andersson and Sandberg (1982) | |||
| HBA | hemoglobin A | 37.5 | 13pter | Bowling et al. (1988) Oakenfull et al. (1993) | ||
| PGD | 6-phosphogluconate | 25 | 2p12–13 | Andersson et al. (1984) | ||
| dehydrogenase | Gu et al. (1992) | |||||
| PGM | phosphoglucomutase | 37.5 | Dawson and Jaeger (1970) | |||
| TF | transferrin | 50 | Gahne (1966) | |||
| RFLPs | ||||||
| FUCA | α-L-1 fucosidase | 37.5 | this study | |||
| GLUT | glucose transporter | 12.5 | this study | |||
| type 1 | ||||||
| LPL | lipoprotein lipase | 12.5 | this study | |||
| MYL | myosin light | 75 | this study | |||
| polypeptide 1, 3 | ||||||
| TYR | tyrosinase | 12.5 | this study | |||
| SSCP | ||||||
| ELA–DRB | equine leucocyte | CTCTGCAGCACATTTCCTGGAG | 25 | 20q14 | Fraser and Bailey (1996) | |
| antigen class II | CGCCGCTGCACCAGGAA | |||||
| Ansari et al. (1988) | ||||||
| Anonymous loci | ||||||
| A-14 | microsatellite | CAGCTGGGTGACACAGAGAG | 75 | 2q14–21 | Marti et al. (1998) | |
| GTCATCACTACTCCCTACAC | ||||||
| A-17 | microsatellite | GTGGAGAGATAAAAGAAGATCC | 50 | 26q13–14 | Marti et al. (1998) | |
| GGCCACAAGGAATGAACACAC | ||||||
| ASB1 | microsatellite | AGCAGAAACCCACTCAAGCC | 75 | Breen et al. (1997) | ||
| GCATAATACCCTCAAGGTC | ||||||
| ASB2 | microsatellite | CCTTCCGTAGTTTAAGCTTCTG | 87.5 | 15q21.3–23 | Breen et al. (1997) | |
| CACAACTGAGTTCTCTGATAGG | ||||||
| ASB3 | microsatellite | AATTCATCTCAGTGCTCTACCAGC | 87.5 | 4q12–13 | Breen et al. (1997) | |
| TTCATTTTCTACATGCACTACAGC | ||||||
| ASB4 | microsatellite | TAAATTGTAAAAGCTGGAGCCG | 100 | 9q16–18 | Breen et al. (1997) | |
| GCAAATAGTAGTTAAGTCCTC | ||||||
| ASB5 | microsatellite | TCGAGGAGCTCATGACCTGG | 75 | 9q16–18 | Breen et al. (1997) | |
| TTGTACAACTCTCCACCATAGC | ||||||
| ASB6 | microsatellite | GGCACAGATGTTAGCTCAGC | 75 | 10p13 | Breen et al. (1997) | |
| ATGGAACCAGCCTGGATTGC | ||||||
| ASB7 | microsatellite | CTGGAAATTACAGTGGTCTTCTGG | 62.5 | 19q14–16 | Breen et al. (1997) | |
| AGGTTTTCAGGGGCTTGCGAAGC | ||||||
| ASB8 | microsatellite | GACAACGTGGCAGCTCACTGCC | 37.5 | 1q16–17 | Breen et al. (1997) | |
| GCAAGTAAGCCATATGTGCATGCG | ||||||
| ASB9 | microsatellite | GTGCGCATGTATGTGCGTGCC | 75 | 10q21–23 | Breen et al. (1997) | |
| ATTTCCACAAGGGACATGAGG | ||||||
| ASB10 | microsatellite | GTTGTCTAGGTGCAGAATCTGG | 75 | Breen et al. (1997) | ||
| GTTATGTCTCCCCTTTCTCTACC | ||||||
| ASB11 | microsatellite | CCACCTATGTGTTCAGTTCACC | 50 | 19q21–22 | Breen et al. (1997) | |
| GCACCAATGTTTATAGACTCCC | ||||||
| ASB12 | microsatellite | TCAGCAATAGAAGCCAGCTCC | 75 | 1q12–13 | Breen et al. (1997) | |
| TCCTATGGAGGTGACCTTCCC | ||||||
| ASB13 | microsatellite | CTCTGAAAGAGCAGGATTGG | 37.5 | 2q14.3–21.2 | Breen et al. (1997) | |
| GTCTTCTAAGTGGTAAGAGCC | ||||||
| ASB14 | microsatellite | CTCCATGAATTCTCGCAGGTTGG | 25 | 6q21 | Breen et al. (1997) | |
| CCATGGGCCATATGCACACTGC | ||||||
| ASB15 | microsatellite | GTCCCAAAGGGACTCAGGAAGG | 37.5 | 15q21 | Breen et al. (1997) | |
| TGGATGCCAGTGCATAGACAG | ||||||
| ASB17 | microsatellite | GAGGGCGGTACCTTTGTACC | 62.5 | 2p14–15 | Breen et al. (1997) | |
| ACCAGTCAGGATCTCCACCG | ||||||
| ASB18 | microsatellite | TGCAGACAAAGCTGGACACTC | 50 | Breen et al. (1997) | ||
| CTGCTGAGAAAGCTTCTGC | ||||||
| ASB19 | microsatellite | GAGTTGGAGCTCAAGTCTGTC | 62.5 | 15q21.3–23 | Breen et al. (1997) | |
| GTTTAGCAACTACAGCGTAGG | ||||||
| ASB22 | microsatellite | GAGGAATGTGAAATACAGGAGG | 75 | 4q21 | Breen et al. (1997) | |
| TTTGTGGTCTTCCGTGCACC | ||||||
| ASB23 | microsatellite | GAGGTTTGTAATTGGAATG | 62.5 | 3q22 | Irvin et al. (1998) | |
| GAGAAGTCATTTTTAACACCT | Lear et al. (1998) | |||||
| ASB35 | microsatellite | ATGCATGAGCAGAGTGTTCTTCC | 62.5 | M. Breen et al. | ||
| TAGTACTTCTCTCTTAATATAAGC | (unpubl.) | |||||
| ASB36 | microsatellite | GAACATGTAGTGTTTACTCTGCC | 50 | M. Breen et al. | ||
| GAAGGTTTGTTGGGTCTTACAAGG | (unpubl.) | |||||
| ASB37 | microsatellite | CCTGCAACTTTTTCCCAGCC | 12.5 | 13q11–12 | Irvin et al. (1998) | |
| GGCAGATGTTAGCTCATGGC | Lear et al. (1998) | |||||
| ASB38 | microsatellite | TGGGGTTGCCTTGGTTACC | 62.5 | Irvin et al. (1998) | ||
| TCAGAGGATGAGGCACAGC | ||||||
| B-8 | microsatellite | TCCTCAGTCCTTTCTCATGC | 62.5 | 15q14–21 | Marti et al. (1998) | |
| AGCTGAAGGCAATCTGTACC | ||||||
| D-8 | microsatellite | TTTTTGTGTCTCAGGAGTGTG | 62.5 | 11p12–13 | Marti et al. (1998) | |
| AGTCTGATGGTGGAGGAAGG | ||||||
| ECA-2 | microsatellite | TTCCCTCCCATGGTTATTTTTC | 100 | (1q2.1) | Sakagami et al. (1995) | |
| TCTCTACTTTCATATACATTTGG | ||||||
| ECA-3 | microsatellite | GGTTCACACAGGAGTCAGGGA | 50 | (2p1.3–4) | Tozaki et al. (1995) | |
| CCTTCTGGTTTGCCTCGTCTC | ||||||
| HLM3 | microsatellite | GAAGGTAGAAAAGGAGGGCTAGAAC | 12.5 | Vega-Pla et al. (1996) | ||
| TCTAGAGGACCATTCTCTGGGCTGTG | ||||||
| HMB1 | microsatellite | GTGTGTATGCTTCCCAACCCTT | 50 | Binns et al. (1995) | ||
| GTTATAAAGCACTATGATCTCA | ||||||
| HMB2 | microsatellite | GTGCCACCACCTCTGTGATT | 50 | Binns et al. (1995) | ||
| TGGAGAAGGATCTTGGGCTC | ||||||
| HMB3 | microsatellite | CAAACATCAGTTAAGAGTGA | 75 | Binns et al. (1995) | ||
| CTCTAATCCAGCAGTGTTCA | ||||||
| HMB4 | microsatellite | AACCGCCTGAGCAAGGAAGT | 62.5 | Binns et al. (1995) | ||
| GCTCCCAGAGAGTTTACCCT | ||||||
| HMB5 | microsatellite | ACGGACACATCCCTGCCTGC | 75 | Binns et al. (1995) | ||
| GCAGGCTAAGGAGGCTCAGC | ||||||
| HMB6 | microsatellite | GAAGATGTCCGCTTTGATAT | 75 | Binns et al. (1995) | ||
| CACTGGCACATCCAGATTTG | ||||||
| HMS1 | microsatellite | CATCACTCTTCATGTCTGCTTGG | 62.5 | Guérin et al. (1994) | ||
| TTGACATAAATGCTTATCCTATGGC | ||||||
| HMS2 | microsatellite | ACGGTGGCAACTGCCAAGGAAG | 62.5 | Guérin et al. (1994) | ||
| CTTGCAGTCGAATGTGTATTAAATG | ||||||
| HMS3 | microsatellite | CCAACTCTTTGTCACATAACAAGA | 62.5 | Guérin et al. (1994) | ||
| CAATCCTCACTTTTTCACTTTGTT | ||||||
| HMS5 | microsatellite | TAGTGTATCCGTCAGAGTTCAAAG | 62.5 | Guérin et al. (1994) | ||
| GCAAGGAAGTCAGACTCCTGGA | ||||||
| HMS6 | microsatellite | GAAGCTGCCAGTATTCAACCATTG | 75 | Guérin et al. (1994) | ||
| CTCCATCTTGTGAAGTGTAACTCA | ||||||
| HMS7 | microsatellite | CAGGAAACTCATGTTGATACCATC | 75 | Guérin et al. (1994) | ||
| TGTTGTTGAAACATACCTTGACTGT | ||||||
| HMS18 | microsatellite | CAACAATGAAAATTTGTCCTGTGC | 62.5 | Godard et al. (1997) | ||
| GTAAATGAGTAGACAATCATGAGG | ||||||
| HMS19 | microsatellite | CTAACCAGCACAGAATGAATGGC | 25 | 4q21 | Godard et al. (1997, 1998) | |
| TAAAAGAACAGTGGAGAGTAAAGTG | ||||||
| HMS20 | microsatellite | TGGGAGAGGTACCTGAAATGTAC | 100 | Guérin and Bertaud (1996) | ||
| GTTGCTATAAAAAATTGTCTCCCTAC | ||||||
| HMS23 | microsatellite | GATCCAATATTGTAAACCCCGCC | 37.5 | Godard et al. (1997) | ||
| CCTTCATAACCCTTATTGCAGCC | ||||||
| HMS45 | microsatellite | TGTTACAGGTATTGGTAAACTGTGC | 75 | Godard et al. (1997) | ||
| GGAACAAGAAGAAATCACTAATGTC | ||||||
| HMS46 | microsatellite | GTCTCAGCCAAAAGGTATTCAAGC | 50 | Godard et al. (1997) | ||
| TGGCACCAATATAGGTCACCTGG | ||||||
| HMS47 | microsatellite | CCTGCTGAGGACCTTGGAAGCT | 25 | 22q19 | Godard et al. (1997, 1998) | |
| ATGTATTTTCAAGTCTAATATCTGCC | ||||||
| HTG2 | microsatellite | GATTGGCAACAGATGTTAACTCGG | 12.5 | Ellegren et al. (1992) | ||
| CCCCATGAGAACTAACAATGTTAG | ||||||
| HTG3 | microsatellite | TAACCTGGGTGCAAAGCCACCCAT | 62.5 | Ellegren et al. (1992) | ||
| TCAGGGCCAATCTTCCTCAC | ||||||
| HTG4 | microsatellite | CTATCTCAGTCTTCATTGCAGGAC | 100 | Ellegren et al. (1992) | ||
| CTCCCTCCCTCCCTCTGTTCTC | ||||||
| HTG5 | microsatellite | TGCTAAGCCTCAGCACATACA | 50 | Ellegren et al. (1992) | ||
| TGGAAATAAGGTTAGCAGGGATGC | ||||||
| HTG6 | microsatellite | CCTGCTTGGAGGCTGTGATAAGAT | 37.5 | 15q26–27 | Ellegren et al. (1992) | |
| GTTCACTGAATGTCAAATTCTGCT | Godard et al. (1998) | |||||
| HTG7 | microsatellite | CCTGAAGCAGAACATCCCTCCTTG | 25 | Marklund et al. (1994) | ||
| ATAAAGTGTCTGGGCAGAGCTGCT | ||||||
| HTG8 | microsatellite | CAGGCCGTAGATGACTACCAATGA | 62.5 | Marklund et al. (1994) | ||
| TTTTCAGAGTTAATTGGTATCACA | ||||||
| HTG9 | microsatellite | TGTGGGAAGAGTGTCAATAGCTGT | 62.5 | 4q21.3 | Marklund et al. (1994) | |
| AGGCATCTGGTTTGCTGCAATTTC | ||||||
| Godard et al. (1998) | ||||||
| HTG10 | microsatellite | CAATTCCCGCCCCACCCCCGGCA | 87.5 | Marklund et al. (1994) | ||
| TTTTTATTCTGATCTGTCACATTT | ||||||
| HTG11 | microsatellite | CAATGATGGTACTTTGCATATTAA | 37.5 | Marklund et al. (1994) | ||
| ATCGGCATGCACACTCATAGGTAG | ||||||
| HTG12 | microsatellite | CACTAGAGTCAGGGGGGGTGGGCT | 12.5 | Marklund et al. (1994) | ||
| TTGGAGTACTCTTTCTCCCTTCCC | ||||||
| HTG13 | microsatellite | TTAGCACGGGGAGATCGGATCCTG | 75 | Marklund et al. (1994) | ||
| GGTCTCCCTCTCCATTCACCCTGC | ||||||
| HTG14 | microsatellite | CCAGTCTAAGTTTGTTGGCTAGAA | 62.5 | Marklund et al. (1994) | ||
| CAAAGGTGAGTGATGGATGGAAGC | ||||||
| HTG15 | microsatellite | TCTTGATGGCAGAGCCAGGATTTG | 37.5 | Marklund et al. (1994) | ||
| AATGTCACCATGCGGCACATGACT | ||||||
| HTG17 | microsatellite | GCTATCCCTCCTGAGTCTTA | 87.5 | Lindgren et al. (1998) | ||
| AGGTAATTTGAAATAAAATACAC | ||||||
| I-12 | microsatellite | AACTAAGCACGTCATACAAG | 37.5 | 19q12–14 | Marti et al. (1998) | |
| CTTGTAGTTTTCGTTGTATAGC | ||||||
| I-18 | microsatellite | CAACAAAGATGTTGCAAGGG | 50 | 16q23–25 | Marti et al. (1998) | |
| TGTGCCTCTTGTCTCTTAGG | ||||||
| LEX2 | microsatellite | AAAAGGAAGACTGGCGACAG | 12.5 | Coogle et al. (1996a) | ||
| GGTGGGGGAAAGAATGGT | ||||||
| LEX4 | microsatellite | AATAGCAAATCTCCCACTTCA | 25 | Coogle et al. (1996a) | ||
| GTCCTCACAACCTCATCATAA | ||||||
| LEX5 | microsatellite | AAGGCAATGCTTATCAAATGC | 50 | Coogle et al. (1996a) | ||
| TTACCCGCAGTGACTTCTATT | ||||||
| LEX7 | microsatellite | GGTAGGGCTCTGGGATGA | 50 | Coogle et al. (1996a) | ||
| AACACTGGGGAAAAGTCAG | ||||||
| LEX8 | microsatellite | AAACTGTCACAACGGTTAGGAC | 37.5 | Coogle et al. (1996a) | ||
| CGAAAAAGCCACTTGAGGTC | ||||||
| LEX9 | microsatellite | AAAGCCGTAAGATTGGGACA | 75 | Coogle et al. (1996a) | ||
| TCCATTGTGAGGGTGTAACA | ||||||
| LEX11 | microsatellite | ATTCCCAGTGAAGTATTGCCA | 37.5 | Coogle et al. (1996a) | ||
| AGAGATGGGTACCTGGGATTC | ||||||
| LEX14 | microsatellite | CCTTACTCACTGGGGAATAAA | 87.5 | Coogle et al. (1996a) | ||
| AGACTGAACACCTAACTATGA | ||||||
| LEX15 | microsatellite | GCATTCCCATCATCACAT | 37.5 | Coogle et al. (1996b) | ||
| CCTGCCTTGCCTCTTTCT | ||||||
| LEX16 | microsatellite | GTGGGGCCGGTATAGTGATTG | 50 | Coogle et al. (1996b) | ||
| ACCCTAACTGATAACTGATAGA | ||||||
| LEX17 | microsatellite | CCTGCCCAAGAAGAACTCAGA | 100 | Coogle et al. (1996b) | ||
| AGCAGTGTATTTTTGAAACAT | ||||||
| LEX18 | microsatellite | TTTCATCACTTTCTGCTTCC | 25 | Coogle et al. (1996b) | ||
| TTCTCTTCCTTTGCTCATCCT | ||||||
| LEX19 | microsatellite | TTCCCTTTTCCTCACATCCT | 87.5 | Coogle et al. (1996b) | ||
| TTTTAGGTTCATCTATGTTGTTGC | ||||||
| LEX20 | microsatellite | GGAATAGGTGGGGGTCTGTT | 37.5 | Coogle et al. (1996b) | ||
| AGGGTACTAGCCAAGTGACTGC | ||||||
| LEX21 | microsatellite | GTAGGCTTTCTGCCAAAAT | 62.5 | Coogle et al. (1996b) | ||
| TGAGGGGAGTCATAAAAA | ||||||
| LEX22 | microsatellite | AACATATCCATCGCCTCACA | 25 | Coogle et al. (1996b) | ||
| TGCAAATTCACTGAGAGTGG | ||||||
| LEX23 | microsatellite | GGATGAAACAGGGAAGGAAA | 62.5 | Coogle et al. (1996b) | ||
| CCAACGGATTCATGAAAGCTA | ||||||
| LEX25 | microsatellite | CAATCGTGGCCCGGTAAC | 50 | Coogle et al. (1996c) | ||
| TTCACTCCAATCCTCAGTCA | ||||||
| LEX27 | microsatellite | ACCACTGGGAAACTGTGTAA | 25 | Coogle et al. (1996c) | ||
| GCCCAGAATCCGAACC | ||||||
| LEX29 | microsatellite | TGGGGTGTCACTGCTTCTC | 62.5 | Coogle et al. (1996c) | ||
| ACTGAGGGCCAGGTTTCTAA | ||||||
| LEX30 | microsatellite | GGAGGGTGCAAGGTGCTA | 37.5 | Coogle et al. (1996c) | ||
| GGCAGGTCAGAAGGGACA | ||||||
| LEX31 | microsatellite | CCCATTAAGAACTTTTCATCCTG | 87.5 | Coogle et al. (1996c) | ||
| GGCAAGCCCCACAAAATTAT | ||||||
| LEX32 | microsatellite | CGTAGTAGGGTTTTGGGTCC | 50 | Coogle et al. (1996c) | ||
| TTGCGTTTCAATTTTTAATGAC | ||||||
| LEX33 | microsatellite | TTTAATCAAAGGATTCAGTTG | 75 | Coogle et al. (1996c) | ||
| TTTCTCTTCAGGTGTCCTC | ||||||
| LEX34 | microsatellite | GCGGAGGTAAGAAGTGGTAG | 50 | Coogle et al. (1997) | ||
| GGCCTAAGATGAGGGTGAA | ||||||
| LEX35 | microsatellite | CCCAGCATATCAAAGATGTT | 75 | Coogle et al. (1997) | ||
| GCTCAGTGTACTTCAAGCAG | ||||||
| LEX37 | microsatellite | GGATTCCTCAACCTCCTAAA | 25 | Coogle et al. (1997) | ||
| AGGGATAAGTGACCACCAC | ||||||
| LEX38 | microsatellite | CTGCATTCCCATCATCACAT | 37.5 | Coogle et al. (1997) | ||
| TGCCTTGCCTCTTTCTGTTTA | ||||||
| LEX39 | microsatellite | CCTCTGTCCCCACTACTCTC | 37.5 | Coogle et al. (1997) | ||
| TTGATCTCCACTCCCAATG | ||||||
| LEX40 | microsatellite | TTTGGCCGTTAGTCGTGT | 37.5 | Coogle et al. (1997) | ||
| GACAAATCGGAAAGTTGGAA | ||||||
| MPZ002 | microsatellite | GATCCCCCCTATTTTATATACAG | 25 | Breen et al. (1994) | ||
| AGGTTCTCATTCTACCTACAAGG | ||||||
| SGCV1 | microsatellite | AGTCACCACCACTCACCTTGT | 37.5 | ? | Godard et al. (1997) | |
| CCAACACAGGATACGGATGA | ||||||
| SGCV3 | microsatellite | CCTTGTGGTGAGTTTTCCTCTT | 37.5 | ? | Godard et al. (1997) | |
| CTGCAAAGCTCTGAAGGTC | ||||||
| SGCV4 | microsatellite | CGACGCCTCCTCCTAAAC | 37.5 | 23q19 | Godard et al. (1997) | |
| CAGCTGTGTGCCTTTGATTAT | ||||||
| SGCV6 | microsatellite | GGGCCTGGTTTTCCTTCTAA | 62.5 | 15q24 | Godard et al. (1997) | |
| GCATTTGTGGCCTGTGTCATA | ||||||
| SGCV7 | microsatellite | GAATTTGAATGTATCTATTCTGAATG | 50 | 18q21 | Godard et al. (1997) | |
| GTGAGTTTTCAAGCTGGCATATTC | ||||||
| SGCV8 | microsatellite | GAGTTCATTCTTTTTCGTGGCTG | 37.5 | 19 | Godard et al. (1997) | |
| GGAAACACCCTAAGTGTCCCTTG | ||||||
| SGCV10 | microsatellite | CATCCATCCTTTCCAGCTCGATATTC | 62.5 | 12p13 | Godard et al. (1997) | |
| CAAGACCGTAACTCAGGAGCCC | ||||||
| SGCV13 | microsatellite | GGACTAAAGCCCAACCATCCAGC | 75 | 11q12 | Godard et al. (1997) | |
| CTCACCAGTAAGGGGTTATGGGGC | ||||||
| SGCV14 | microsatellite | CCCCAGTGGTTCCATTTAGATGT | 75 | 21q13 | Godard et al. (1997) | |
| GGGGAGAGCATTTTGGTGA | ||||||
| SGCV16 | microsatellite | AATTCTCAAATGGTTCAGTGA | 37.5 | 21q13 | Godard et al. (1997) | |
| CTCCCTCCCTTCCTTCTA | ||||||
| SGCV17 | microsatellite | GGCCCAACGTCTATAGAAAGATGT | 37.5 | ? | Godard et al. (1997) | |
| CCCCCAAATGGCTATTTTCTAA | ||||||
| SGCV18 | microsatellite | TGGGGAAGAGGGATTCAT | 62.5 | 3p13-14 | Godard et al. (1997) | |
| AAATGCCAAGCCTATCTATGC | ||||||
| SGCV19 | microsatellite | GCCCCCACCTGCTCCACC | 62.5 | 22q19 | Godard et al. (1997) | |
| GGGGCAAAGTGGAAATCC | ||||||
| SGCV23 | microsatellite | GGCTTAAGATATGGGTGAGTAAGG | 87.5 | 4q27 | Godard et al. (1997) | |
| GCCCACCCTCTTACTTTTCTCAA | ||||||
| SGCV24 | microsatellite | CTACCATTGAAGAGGGGTGGC | 50 | 11p12 | Godard et al. (1997) | |
| GAAACGAGCAGGAAGTGAATCTCC | ||||||
| SGCV25 | microsatellite | GCCCATATTAGTAGGACTGTG | 37.5 | 1q14 | Godard et al. (1997) | |
| GGCCATATTCAGCAGAGCT | ||||||
| SGCV28 | microsatellite | CTGTGGCAGCTGTCATCTTGG | 25 | Godard et al. (1997) | ||
| CCCAATTCCAGCCCAGCTTGC | ||||||
| SGCV30 | microsatellite | ACTGGAGGGGTGAAACAGATTCAGA | 75 | 10qter | Godard et al. (1997, 1998) | |
| GGAAGGGAGGTCATCAGAA | ||||||
| SGCV32 | microsatellite | TGTTCCAAAATGGAGGGTGAGCC | 62.5 | ? | Godard et al. (1997) | |
| CCACAGGCTCTTAAAACCAGAAGC | ||||||
| VHL20 | microsatellite | CAAGTCCTCTTACTTGAAGACTAG | 87.5 | van Haeringen et al. (1994) | ||
| AACTCAGGGAGAATCTTCCTCAG | ||||||
| VIAS-H34 | microsatellite | GTATCAGCTTAACAGCTTTCTTTAAATG | 37.5 | Ewen and Matthews (1994a) | ||
| CTCCCGTCTCCTCTCTTGTTC | ||||||
| VIAS-H39 | microsatellite | AATGTGATTATAGCAGATAGGGTT | 37.5 | Ewen and Matthews (1994b) | ||
| CTATCCAATCTTCACAATCATGTA | ||||||
-
↵Observed heterozygosity among the eight sires in the reference pedigree.
-
↵The assignment provided here is based on new experiments, which indicates that these clones are chimeric (M. Breen, unpubl.). Within the chimeric clones, the largest pieces of DNA map to the locations indicated in Breen et al. (1997). However, the sequence surrounding the microsatellite loci have now been confirmed to map to the locations given here.
-
↵Chromosome band identification was done using an old idiogram nomenclature.
-
↵Physical assignment does not fit with linkage data.
