Large-Scale Taxonomic Profiling of Eukaryotic Model Organisms: A Comparison of Orthologous Proteins Encoded by the Human, Fly, Nematode, and Yeast Genomes

Table 1.

Forty-Two Quartets of Orthologous Proteins

Length in amino acids is given for the human ortholog. (See Fig. 1 for the three possible tree topologies A, B, and C.) (ND) Not determined because yeast–human % identity <35% (see Methods). (*) Nematode SERCA ortholog sequence was determined manually from unfinished sequence of cosmid K11D9. (#) Number. The list of entries including rodent and bacterial orthologs is available athttp://www.sequana.com/publications/model_proteomes.