
View of the finished region of F59D12 in DOTTER (Sonnhammer et al. 1994) showing comparison of the sequence with itself. The main diagonal from top left to bottom right shows the in-phase identity. The three broken lines perpendicular to the main diagonal represent the three inverted repeats that caused the problem. The short lines parallel to the main diagonal are the tandem repeats that allowed 400 bp to delete.











