Analysis of the Quality and Utility of Random Shotgun Sequencing at Low Redundancies

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Figure 3.
Figure 3.

Assessment of consensus base quality at lower redundancies of sequencing. The Phrap value generated for each consensus base was examined, and the total number of bases that had a value above 40 were counted. The number of bases containing values >40 is represented as a percentage of the total number of bases in the project. Low values at the termini of contigs were excluded from the totals. A bar (dashes) at the 90% level is shown for reference purposes.

This Article

  1. Genome Res. 8: 1074-1084

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