Eukaryotic Promoter Recognition

Table 2.

Program Accuracy

Audic Autogene GeneID NNPP P’Find P’Scan TATA TSSG TSSW
Sensitivity 5/24  24% 7/24  29% 10/24  42% 13/24  54% 7/24  29% 3/24  13% 6/24  25% 7/24  29% 10/24  42%
Specificity 33 fp  1/1004  bp 51 fp  1/649  bp 51 fp  1/649  bp 72 fp  1/460  bp 29 fp  1/1142  bp 6 fp  1/5520  bp 47 fp  1/705  bp 25 fp  1/1325  bp 42 fp  1/789  bp
  • Overall accuracy of the programs tested. For each program the sensitivity (both as the number and percentage of promotors correctly detected) and specificity (as number of false positives and number of base pairs per false positive) is given.

This Article

  1. Genome Res. 7: 861-878

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