A Transposon-Based Strategy for Sequencing Repetitive DNA in Eukaryotic Genomes

Table 3.

Plasmid and Cosmid Targets Analyzed

Target name DNA insert Species Vector
pSD523 8.0 kb genomic S. cerevisiae pRS200
pCAR143  5.0 kb genomic S. cerevisiae pRS200
pCAR206 2.1 kb genomic S. cerevisiae pMOB
pCAR158 2.0 kb genomic S. cerevisiae pBluescript
p3C-1 11 kb genomic S. cerevisiae YCp50-LEU2
pSD553 4.5 kb genomic S. cerevisiae pRS316
pSD546 3.0 kb genomic S. cerevisiae pRS323
pEC89  3.0 kb genomic S. cerevisiae pBluescript
pKN116  5.0 kb genomic S. pombe pBluescript
p3.1 15 kb genomic S. pombe YCp50-LEU2
cosmid JEDI C III 45 kb genomic L. donovani cosmid
F18E3-10 2.6 kb genomic C. elegans pUC18
C35B1  3.5 kb genomic C. elegans pUC18
F32D1 3.0 kb genomic C. elegans pUC18
ZK6 0.6 kb genomic C. elegans pUC18
F23F1 1.0 kb genomic C. elegans pUC18
F49F1 2.8 kb genomic C. elegans pUC18
IMAGE clone 1  1–4 kb cDNA H. sapiens Lafmid
IMAGE clone 2 1–4 kb cDNA H. sapiens Lafmid
IMAGE clone 3 1–4 kb cDNA H. sapiens Lafmid
IMAGE clone 4  1–4 kb cDNA H. sapiens Lafmid
IMAGE clone 5 1–4 kb cDNA H. sapiens Lafmid
IMAGE clone 6 1–4 kb cDNA H. sapiens Lafmid
IMAGE clone 7  1–4 kb cDNA H. sapiens Lafmid
IMAGE clone 8 1–4 kb-cDNA H. sapiens Lafmid
IMAGE clone 9 1–4 kb cDNA H. sapiens Lafmid
pWAFp 5.0 kb genomic H. sapiens pBluescript
pG2  7.0 kb cDNA H. sapiens pUC19
pMG4 3.0 kb genomic H. sapiens pBluescript
pMG10 4.0 kb genomic H. sapiens pBluescript
pJEST  2.5 kb cDNA H. sapiens pUC18
pSD590  7.0 kb genomic H. sapiens pBluescript
p2A9 5.0 kb cDNA H. sapiens pUC8
pBD28  6.0 kb cDNA H. sapiens pUC8
cosmid F10080 40 kb genomic H. sapiens Lawrist 5
cosmid F13544 35 kb genomic H. sapiens Lawrist 5
cosmid F23932 45 kb genomic H. sapiens Lawrist 5
  • Plasmid and cosmid targets for which artificial transposon insertion libraries have been constructed and used for mapping and/or sequencing.

  • Saccharomyces cerevisiae; Schizosaccaromyces pombe; Leishmania donovani; Caenorhabditis elegans; Homo sapiens.

This Article

  1. Genome Res. 7: 551-563

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