Large-Scale Concatenation cDNA Sequencing

Table 1.

Comparison of Clone and End Sequences for DNA Similarity Matches

Clone Length (bp) Match Sequence
full length (acc. no.) similarity (%) end match
A1* 1876 serine/threonine protein kinase X70764 54
B1 1410
C1 1632
D1 1554 human mRNA for L2TR-1 D38496 99 +
F1 881
G1 1601
H1* 1834 tissue-type plasminogen activator enhancer Z48484 67
I1* 1680 Drosophilafat protein gene M80537 57
L1 1615
N1 1456
P1 1606 glycerol-3-phosphate dehydrogenase U36310 99 +
D2 1838 opioid-binding cell adhesion molecule L34774 99 +
E2 1600
F2 1203
G2 1179 B. malayi 63-kD antigen J03266 66 +
J2 1261 mouse X11 protein L34676 91 +
K2 1218
L2 1493
M2 1488 human tumor necrosis factor receptor M85145 76 +
N2 1706
O2 1430 human oligodendrocyte myelin glycoprotein L05367 84 +
P2 1470
A3 1346 human deoxyhypusine synthase L39068 100 +
B3 1584
J3 1255 human Zic protein D76435 100 +
K3* 1768 thymidylate syntase D00596 66
M3 1579 human DNA with a HBV insertion site M15772 100 +
N3 1536
P3/P5 1414 apurinic/apyrimidinic endonuclease M81955 99 +
B4 1296 cyclin-dependent protein kinase M14505 100 +
I4 1275 yeastCOX11gene X55731 65 +
J4/J6 1198
K4 1302 human breakpoint cluster region gene U07000 70 +
L4 1440 human eIF-4AI D13748 99 +
M4 1506
N4 1060
P4 1659 human oligodendrocyte myelin glycoprotein L05367 84 +
A5* 1574 human lysozyme M19045 82
B5 1681 disulfide isomerase-related protein P5 D49489 99 +
D5 982
E5 1418
G5 749
H5* 1719 human IgM heavy chain X57331 73
I5 1480 albumin D-box binding protein U06936 99 +
K5 1449
L5 1451
M5 1346
B6 1396
E6 1616
F6/G6* 1875 2-oxoglutarate dehydrogenase D32056 67
H6 1833
K6 1362
M6 1685 female ovary mRNA for metalloproteinase D83646 100 +
N6 1792
O6 1444
P6 1418
E7* 1949 dihydrolipoamide acetyltransferase Y00978 58
G7 1637
H7 1499
I7 1529 neuronal olfactomedin-related ER localized protein U03417 89 +
M7 1487
N7 1610
P7 1976
D8/E8 1567
H8 1738
  • (*) Computer search matched by clone but not by end sequences.

This Article

  1. Genome Res. 7: 353-358

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