Strain-level metagenomic profiling using pangenome graphs with PanTax

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Figure 4.
Figure 4.

Benchmarking results of strain-level taxonomic profiling. (A) Profiling for spiked-in data sets. (B) Profiling for simulated data sets (sim-high-gtdb) using the GTDB reference database. To visualize all metrics consistently (i.e., with higher values indicating better performance), we present the 1-L1 distance and 1-BC distance. (AUPR) Area under the precision-recall curve.

This Article

  1. Published in Advance January 14, 2026, doi: 10.1101/gr.280858.125 Genome Res. 36: 405-420

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