Table 1.
Different combinations of data processing used in this work, which generated long-read genome assemblies with different depths of coverage
| Basecaller | Model | Subsampling | HERRO | Assembly | Medaka |
|---|---|---|---|---|---|
| Dorado v0.9.0 | dna_r10.4.1_e8.2_400bps_hac@v5.0.0 | 30× 40× 50× 60× 70× 80× 90× |
N | Flye v2.9.5 | r1041_e82_400bps_hac_v5.0.0 |
| Y | NA | ||||
| dna_r10.4.1_e8.2_400bps_sup@v5.0.0 | N | r1041_e82_400bps_sup_v5.0.0 | |||
| Y | NA |
