Oxygen-induced stress reveals context-specific gene regulatory effects in human brain organoids

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

Figure 1.
Figure 1.

A panel of brain organoids yields diverse cell types across individuals. (A) Workflow of data collection. Brain organoids were first differentiated (see Methods) and adapted to physiological oxygen before 24-h exposure to high, low, or control oxygen levels. Data shown in this figure are taken from the 10% “normoxia” condition. (B) UMAP representation of organoid single-cell transcriptomes highlighting principal cell types obtained across all individuals in our iPSC panel in the normoxia condition. (C) Proportion of cells from each parental cell line by annotation, with colors corresponding to the UMAP shown in B.

This Article

  1. Genome Res. 35: 1689-1700

Preprint Server