De novo gene birth and the conundrum of ORFan genes in bacteria

Table 1.

Studies investigating the origin of ORFans in bacteria

Year of publication Hypotheses investigated Taxa investigated Reference
2024 Emergence from noncoding sequences, frameshifting, phage origin Various taxa in human gut microbiome Vakirlis and Kupczok 2024
2023 Emergence from noncoding sequences Bacillus genus Karlowski et al. 2023
2021 Frameshifting Escherichia coli Watson et al. 2021
2015 Phage origin Various Lobb et al. 2015
2010 Emergence from intergenic sequences, frameshifting, phage origin Various Yomtovian et al. 2010
2009 Phage origin Various Cortez et al. 2009
2006 Phage origin Various Yin and Fischer 2006
2004 Phage origin Escherichia coli Daubin and Ochman 2004a

This Article

  1. Genome Res. 35: 1679-1688

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