Figure 2.
Chr 6 and MHC read concordance. Venn diagrams showing the read concordance of a representative subsample of HG005 Chr 6 reads aligned by Moni-align, vg map, and vg giraffe to the pan-MHC Chr 6 pangenome. The diagram on the left shows the read concordance of the Chr 6 aligned reads, and the right diagram shows the read concordance of the MHC aligned reads. A read is considered concordant if its mapping position by one aligner is within 10 bp of another.
