Table 1.
Summary of assembly statistics and quality metrics of the ONT duplex genome assembly of Pst104E
| Statistic | Full dikaryotic | Haplotype A | Haplotype B |
|---|---|---|---|
| Assembly size (bp) | 152,328,638 | 77,128,783 | 75,199,855 |
| No. of T2T chromosomes | 35/36 | 17/18 | 18/18 |
| N50 (bp) | 4,614,849 | 4,713,886 | 4,606,998 |
| % GC content | 44.41 | 44.41 | 44.42 |
| % TE content | 44.51 (68 Mbp) | 45.16 (35 Mbp) | 43.87 (33 Mbp) |
| No. of gaps | 5 | 4 | 1 |
| % complete BUSCOs | 92.6 | 91.9 | 91.4 |
| No. of heterozygous SNPs/Mbp | 6.8 | 6.9 | 6.7 |
| No. of homozygous SNPs/Mbp | 1.1 | 1.3 | 0.8 |
| LAI | 18.3 | 27.2 | 24.8 |
| CRAQ R-AQI | 94.7 | 94.3 | 95.1 |
| CRAQ S-AQI | 97.4 | 97.4 | 97.4 |
