Lake Malawi cichlid pangenome graph reveals extensive structural variation driven by transposable elements

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Figure 5.
Figure 5.

PCR genotyping of SVs. (A) Validation of predicted SVs in original samples. Green indicates match; amber, match with heterozygosity; and red, no match. (B) Wider genotyping across aquarium-grown individuals: 10 A. calliptera (five males, five females), nine Tropheops males, and six Rhamphochromis (one male, five females).

This Article

  1. Published in Advance April 10, 2025, doi: 10.1101/gr.279674.124 Genome Res. 35: 1094-1107

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