Optimizing nanopore adaptive sampling for pneumococcal serotype surveillance in complex samples using the graph-based GNASTy algorithm

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Figure 4.
Figure 4.

Spn23F CBL enrichment assembly comparison. Each panel describes a 23F CBL assembly generated from 0.1 Spn23F dilutions (8 × 10−4 23F CBL proportion) with each nontarget organism. For each panel, the top plot shows the read coverage (solid), defined as the absolute number of bases aligning to a locus, and the number of small errors (≤50 bp, dashed), and the bottom plot shows the aligned contigs (colors) and large errors (black bars >50 bp) in each assembly.

This Article

  1. Published in Advance March 4, 2025, doi: 10.1101/gr.279435.124 Genome Res. 35: 1025-1040

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