ScisTree2 enables large-scale inference of cell lineage trees and genotype calling using efficient local search

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Figure 9.
Figure 9.

Analysis of the HGSOC data by ScisTree2. Left: The clonal tree of HGSOC with six mutated genes considered important for cancer development in the original study (Laks et al. 2019). Number at a leaf: clone ID (with a distinct color). Right: Reconstructed cell lineage tree of tumor cells (colored w.r.t. their clones) with the same genes mapped on. Outer ring: three cell lines OV2295, TOV2295(R), and OV2295(R2). Inner ring: (colored) clones from the original study. Genes marked as red stars are ancestral genes, whereas others are clade genes.

This Article

  1. Genome Res. 35: 2781-2791

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