ScisTree2 enables large-scale inference of cell lineage trees and genotype calling using efficient local search

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Figure 11.
Figure 11.

An illustration of (rooted) SPR local search. The subtree rooted at u (whose parent is v) is pruned and regrafted to the edge entering w2. Note: the lowest common ancestor of v and w2 in the tree before SPR is r.

This Article

  1. Published in Advance September 3, 2025, doi: 10.1101/gr.280542.125 Genome Res. 35: 2781-2791

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