Joint imputation and deconvolution of gene expression across spatial transcriptomics platforms

Table 1.

Comparison of average holdout R2 scores across methods

Tangram Baselines
Data set SIID Cell mode Cluster mode SLAT SANTO A B C D
BRCA 0.2527 0.1874 0.1556 0.0688 0.1042 0.0373 0.0807 0.0766 0.0664
CRC 0.2248 0.1789 0.1382 0.0608 0.0727 0.0325 0.0573 0.0443 0.0412

  • Bold indicates the best performer.

This Article

  1. Published in Advance November 17, 2025, doi: 10.1101/gr.280555.125 Genome Res. 35: 2734-2743

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