OMKar automates genome karyotyping using optical maps to identify constitutional abnormalities

Table 3.

OMKar G2P explanations for undiagnosed postnatal cases

Sample Clinical indication Clinical diagnosis OMKar genotype OMKar G2P prediction
2081 Absent teeth, ID ID (new) PAX8 deletion Congenital hypothyroidism nongoiterous type 2
2280 Mild dysmorphic features, hypotonia, DD Kabuki syndrome; unknown (New) deletion in the middle of translocation, WDFY3+HNRNPD Primary microcephaly or macrocephaly with developmental delay; HNRNPD-related developmental disorder (monoallelic)
2276 Seizures, ID Unknown Translocation interrupts TANC2 TANC2-related neurodevelopmental and psychiatric disorders
2281 DD DD Transposition interrupts MBD5 EHMT1-like ID
2282 ID ID Translocation interrupts SOX5 12P12.5 intragenic deletions associated with ID
  • (ID) Intellectual disability, (DD) developmental delay.

This Article

  1. Genome Res. 35: 2671-2681

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