Pangenome-based genome inference using integer programming

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Figure 4.
Figure 4.

Performance comparison between the ILP and IQP solutions implemented in PHI. We compared their runtime (A,B) and memory usage (C,D) using short-read sequencing data sets sampled from five haplotypes.

This Article

  1. Published in Advance August 21, 2025, doi: 10.1101/gr.280567.125 Genome Res. 35: 2661-2670

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