Spatial Cellular Networks from omics data with SpaCeNet

Table 1.

Performance in terms of AUPRC to recover intra- (top) and intercellular (bottom) interactions from in silico tissues generated via mechanistic modeling for MISTy and SpaCeNet

MISTy SpaCeNet
AUPRC (intracellular)
 Tissue 1 0.21 0.58
 Tissue 2 0.19 0.54
 Tissue 1 + 2 0.21 0.50
AUPRC (intercellular)
 Tissue 1 0.07 0.21
 Tissue 2 0.06 0.22
 Tissue 1 + 2 0.07 0.22

This Article

  1. Genome Res. 34: 1371-1383

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