A simple method for finding related sequences by adding probabilities of alternative alignments

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

Figure 7.
Figure 7.

An alignment (the same as Fig. 4B) with colors indicating the probability that each column is correct. “∼” indicates the core (Fig. 1), whose column probabilities are assumed to be one, and “★” noncore exact matches.

This Article

  1. Genome Res. 34: 1165-1173

Preprint Server