Identifying genes within pathways in unannotated genomes with PaGeSearch

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Figure 7.
Figure 7.

Runtime (A) and maximum memory usage (B) of PaGeSearch, GeMoMa, and miniprot by genome size. The unit for runtime is seconds, and the unit for genome size is base pairs. The variation in runtime and maximum memory usage observed for the same genome size can be attributed to differences in the number of query genes.

This Article

  1. Published in Advance June 10, 2024, doi: 10.1101/gr.278566.123 Genome Res. 34: 784-795

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