GeneMark-ETP significantly improves the accuracy of automatic annotation of large eukaryotic genomes

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

Figure 5.
Figure 5.

Gene-level Sn and Pr of the gene predictions in the D. melanogaster genome. The gene predictions were generated by GeneMark-ET (green), GeneMark-EP+ (orange), and GeneMark-ETP (red). We also show the Sn and Pr values for the Union (square) and the Intersection (triangle) of the sets of GeneMark-ET and GeneMark-EP+ gene predictions and the “best combination” of these two gene-prediction sets (diamond). The true positives were defined with respect to the annotation of the D. melanogaster genome. The “species excluded” database was used for the GeneMark-EP+ and GeneMark-ETP runs.

This Article

  1. Genome Res. 34: 757-768

Preprint Server