Differences in molecular sampling and data processing explain variation among single-cell and single-nucleus RNA-seq experiments

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

Figure 4.
Figure 4.

Approaches for measuring and mitigating sampling bias. (A) GOseq depicts and models the relationship between a bias term (gene length) and the chance of appearing differentially expressed. Points represent bins of 300 genes each on log10 scale. (B) After correcting for gene length, GO terms enriched in nuclei are consistent with known patterns of RNA localization.

This Article

  1. Genome Res. 34: 179-188

Preprint Server