MCHelper automatically curates transposable element libraries across eukaryotic species

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

Figure 4.
Figure 4.

Genome-wide number and type of TE annotations for each of the three libraries analyzed in the six species. The BDGP, EDTA, MClibrary, Dfam-zebrafish, MTEC, and Dfam-Human libraries were used as reference for D. melanogaster, O. sativa, C. cornix, D. rerio, Z. mays, and H. sapiens, respectively. (A) Number of copies annotated by each library. (B) Number of copies categorized as short (<100 bp). (C) Number of copies categorized as overlapping (annotated by two or more consensus sequences).

This Article

  1. Published in Advance December 9, 2024, doi: 10.1101/gr.278821.123 Genome Res. 34: 2256-2268

Preprint Server



Current Issue

  1. January 2026, 36 (1)
  1. Current Issue
  1. Alert me to new issues of Genome Research