Seamless, rapid, and accurate analyses of outbreak genomic data using split k-mer analysis

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Figure 4.
Figure 4.

Empirical scaling of SKA2 computational efficiency using increasing block sizes from 100 isolates of the S. pneumoniae IC1 cluster. The numbers of split k-mers represent the total numbers of split k-mers contained across all samples.

This Article

  1. Published in Advance October 15, 2024, doi: 10.1101/gr.279449.124 Genome Res. 34: 1661-1673

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