AGAP duplicons associate with structural diversity at Chromosome 10q11.22

Table 2.

Copy number estimates in samples with alternative haplotypes

Sample Population Haplotypes ANTXRL (SUNK) ANXA8 (WSSD) GPRIN2 (WSSD) NPY4R (WSSD) SYT15B (WSSD) PTPN20 (WSSD) AGAP4 (WSSD)
HG00735 AMR H1, H4 2 5 5 5 5 4 19
HG01978 AMR H5, H1 3 5 5 5 5 4 20
HG01361 AMR H1, H6 3 6 6 6 6 4 23
HG00733 AMR H7, NA 3 5 6 6 6 4 21
HG01358 AMR H1, H8 2 4 4 4 4 4 19
HG01891 AFR H1, H10 2 3 3 3 3 4 18
HG03540 AFR H9, NA 2 4 4 4 4 4 18

This Article

  1. Genome Res. 34: 1487-1499

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