Accurate and fast graph-based pangenome annotation and clustering with ggCaller

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Figure 6.
Figure 6.

Comparison of within-COG start site soft-clipping and average amino acid identity (AAI) between gene prediction workflows. (A) Description of start site soft-clipping. (B) Boxplot comparisons of start site soft-clipping protein sequences of Pbp1a, Pbp2a, PspA, and PsrP based on alignment with the manually annotated reference in Spn23F. (C) Histograms of pairwise average AAI within each COG.

This Article

  1. Published in Advance August 24, 2023, doi: 10.1101/gr.277733.123 Genome Res. 33: 1622-1637

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