Deriving confidence intervals for mutation rates across a wide range of evolutionary distances using FracMinHash

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Figure 2.
Figure 2.

True versus estimated containment index for both the Mash and FracMinHash approaches for two sets with dissimilar sizes. The containment index of a Staphylococcus genome is computed when C% of this genome is inserted into an assembled metagenome. Error bars indicate standard deviation over hash seed values.

This Article

  1. Published in Advance June 21, 2023, doi: 10.1101/gr.277651.123 Genome Res. 33: 1061-1068

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