Figure 4.
Consensus genotypic trajectories from PLIGHT_Iterative for the diploid mosaic genome of HG00360 + HG00342 across 30 SNPs in Chromosome 1, where the consensus score is evaluated by weighting the haplotypes in each trajectory in proportion to their occurrence across all three chromosomes. The composition of the best-fit pair of haplotypes at each locus is depicted by two yellow tags, one below and one above the red dots. (A) niter = 20, replicate 1; (B) niter = 30, replicate 1. Shown at the top of each panel are the most frequent haplotypes within each segment indicated. The second replicates of niter = 20 and niter = 30 are shown in the Supplemental Materials.
