Whole-genome long-read sequencing downsampling and its effect on variant-calling precision and recall

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Figure 2.
Figure 2.

SV discovery. (A) Venn diagram comparing Sniffles detection of SVs (both insertions and deletions) for 30× HiFi and 30× standard ONT input read sets. (B) Venn diagram comparing Sniffles SV discovery at 12× and 30× HiFi call sets. A consistent set of calls is generated above 12×.

This Article

  1. Published in Advance December 7, 2023, doi: 10.1101/gr.278070.123 Genome Res. 33: 2029-2040

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