ESICCC as a systematic computational framework for evaluation, selection, and integration of cell-cell communication inference methods

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Figure 11.
Figure 11.

CCCbank as an ensemble pipeline for integrative CCC inference. (A) Illustration of CCCbank pipeline. (B) Comparison of performance changes in terms of overall accuracy for the three top-ranked methods (i.e., RNAMagnet, CellChat, and scSeqComm), each equipped with different databases. (C) Comparison of performances of different methods equipped with the same database, that is, CellChat or CellPhoneDB.

This Article

  1. Published in Advance October 12, 2023, doi: 10.1101/gr.278001.123 Genome Res. 33: 1788-1805

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