TE occupancy at XGFs, housekeeping genes (HKGs), and all other genes and the expression of XGFs and HKGs in A. pisum (Jaquiéry et al. 2022). (A) TE coverage around XGFs, HKGs, and all other genes. Box limits indicate upper and lower quartiles, and central lines indicate mean TE coverage. (B) TE count around XGFs, HKGs, and all other genes. Box limits indicate upper and lower quartiles, and central lines indicate mean TE count. (C) Expression of XGFs and HKGs in germline tissues (testis and ovary) in A. pisum, expressed as reads per kilobase of transcript per million base pairs sequenced (RPKM), to determine expected expression of XGFs in germline cell types. Gene types are indicated by colors in the key.
