Lossless indexing with counting de Bruijn graphs

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Figure 5.
Figure 5.

Detection of the delta variants of the SARS-CoV-2 spike protein in SMRT virus sequencing samples deposited on the SRA. (Left) The number of samples detected to contain (orange) and not contain (blue) the SARS-CoV-2 delta variant. (Right) The number of reads containing defining mutations contributed by samples containing the SARS-CoV-2 delta variant.

This Article

  1. Published in Advance May 24, 2022, doi: 10.1101/gr.276607.122 Genome Res. 32: 1754-1764

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