Assembler artifacts include misassembly because of unsafe unitigs and underassembly because of bidirected graphs

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Figure 2.
Figure 2.

Illustration of the cases in Theorem 1. The graph in the figure represents Formula, where k = 3 and Formula. The segments are marked by dashed lines with their starts marked with a dot and their ends marked with a diamond. The unitig w = {ACT, CTT, TTG} is unsafe because for each of the segment, one of the cases in Theorem 1 is true. For segment colored in green, case 1 holds; for red, case 2; for blue, case 3; and for orange, case 4.

This Article

  1. Genome Res. 32: 1746-1753

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