Scalable and model-free detection of spatial patterns and colocalization

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

Figure 2.
Figure 2.

Application of SpaGene to spatial transcriptomics of main olfactory bulb (MOB) data. (A) Visualization of five known spatially variable genes located in specific MOB layers (high expression in red, and low in blue), with adjusted P-values from SpaGene. (B) Enrichment scores of markers in location-restricted cell types by SpaGene, SpatialDE, and SPARK-X.

This Article

  1. Published in Advance September 9, 2022, doi: 10.1101/gr.276851.122 Genome Res. 32: 1736-1745

Preprint Server



Current Issue

  1. January 2026, 36 (1)
  1. Current Issue
  1. Alert me to new issues of Genome Research