
Gene family PAVs in 111 rice accessions. (A) Heat map of gene family PAVs of 111 rice accessions. (B) The pan-genome size estimation using 111 rice accessions for all rice accessions and subpopulations (All, Wild, XI, cA, GJ, cB). (C) The sample numbers and percentages of core, softcore, distributed, and private gene families. (D) The percentage of core, softcore, distributed, and private members in gene families. (E) The PCA analysis of 111 rice accessions using gene family PAVs. (F) The clustering of 111 rice accessions using gene family PAVs.











