A curated collection of Klebsiella metabolic models reveals variable substrate usage and gene essentiality

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Figure 3.
Figure 3.

Variable growth phenotypes across all seven taxa in KpSC. (Left) Core gene phylogeny for all 37 strains, with tips colored by species per legend. (Middle) Heatmap of variable substrates for which both phenotypic growth results and model predicted results were available. White indicates no growth, and color indicates growth. False positive calls are shown in yellow, and false negative calls are in gray (per legend). (Right) Heatmap of variable substrates for which only model predictions were available. White indicates no growth, color indicates growth, with substrate type indicated per legend.

This Article

  1. Genome Res. 32: 1004-1014

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