Identification and characterization of centromeric sequences in Xenopus laevis

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Figure 1.
Figure 1.

Identification of Cenpa-associated sequences by k-mer analysis. (A) Scatterplot of 25-bp k-mer counts normalized to sequencing depth found in input and Cenpa ChIP-seq libraries. (B) Phylogram of representative Cenpa-associated sequences that contained a minimum of 80 enriched 25-bp k-mers identified as most abundant after clustering by sequence similarity. FCR monomers chosen for FISH experiments are colored and Fcr1 identified by Edwards and Murray (2005) is labeled.

This Article

  1. Genome Res. 31: 958-967

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