Variational inference using approximate likelihood under the coalescent with recombination

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Figure 6.
Figure 6.

Inference results on target 106. The factorized normal variational posterior distribution of each parameter inferred by VICAR is shown in blue. The red triangle shows the maximum likelihood solution obtained by Hobolth et al. (2007). The green triangle shows the maximum likelihood solution obtained by Dutheil et al. (2009). For the 2009 model, we took the result after bias correction. The purple square shows the solution obtained by diCal2, and the blue circle is the VICAR solution. Given that VICAR uses Bayesian inference, it provides confidence measures; shown are standard deviations of the Gaussian posteriors.

This Article

  1. Genome Res. 31: 2107-2119

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