Effective sequence similarity detection with strobemers

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Figure 1.
Figure 1.

An example of strobemer matches for minstrobes, randstrobes, and hybridstrobes with two different parameterizations each (separate panels). Each panel shows matches between a string, s, of 100 nt and a string, t, derived from simulating mutations every 15th position in s. Indels and substitutions are chosen at random with equal probability. The matches are plotted with respect to the positions in s on the 83 possible matching positions (x-axis). Each row in a panel corresponds to a separate simulation.

This Article

  1. Genome Res. 31: 2080-2094

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