RNA-Bloom enables reference-free and reference-guided sequence assembly for single-cell transcriptomes

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Figure 2.
Figure 2.

Assembly quality on mouse simulated and real bulk RNA-seq data. Assembly sensitivity was measured as the number of isoforms reconstructed to at least 95% annotated isoform length (denoted as I95) in each data set normalized by the total number of isoforms in reference annotation. Misassembly rate was calculated based on I95, denoted as MR95.

This Article

  1. Published in Advance August 17, 2020, doi: 10.1101/gr.260174.119 Genome Res. 30: 1191-1200

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