Figure 7.
Calls tagged by 36F11 k-mers novel with respect to 3D7, redescribed against combinations of other reference sequences. Stacked bars represent fraction of novel k-mers linked to homozygous-reference (hom-ref) and homozygous-variant (hom-var) calls or of k-mers where no call could be made. Colors represent the specific haplotypic background the call was placed on (if a call can be equally described on multiple backgrounds, one is chosen at random).
