TRACE: transcription factor footprinting using chromatin accessibility data and DNA sequence

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Figure 3.
Figure 3.

TRACE can perform well on ATAC-seq data. (A) Average rank of PR AUC across all TFs tested using ATAC-seq data for TRACE, DeFCom, and HINT-ATAC. (B) DNase-seq–based and ATAC-seq–based TRACE performance comparison on PR AUC.

This Article

  1. Published in Advance July 6, 2020, doi: 10.1101/gr.258228.119 Genome Res. 30: 1040-1046

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