Integrated annotations and analyses of small RNA–producing loci from 47 diverse plants

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Figure 4.
Figure 4.

Distribution of sRNAs in the body region of protein-coding mRNAs. (A) Heatmap showing the proportion of mRNAs containing siRNA21 loci that have 0%–100% of their aligned sRNAs mapped to their exons: 0% means all sRNAs map to introns; 100% means all sRNAs map to exons. (B) As in A, except for siRNA24 loci. (C) Heatmap showing the proportion of mRNAs containing siRNA21 loci with 0%–100% of their aligned sRNAs mapped to the coding strand of the mRNA: 0% means all sRNAs map to the noncoding strand; 100% blue means all sRNAs map to the coding strand of the mRNA. (D) As in C, except for siRNA24 loci. Each row is a given species (for species codes, see Table 1), grouped taxonomically. (Eu) Eudicots; (BA) basal angiosperm; (G) gymnosperm; (Br) bryophyte.

This Article

  1. Published in Advance March 16, 2020, doi: 10.1101/gr.256750.119 Genome Res. 30: 497-513

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