Quantitative prediction of enhancer–promoter interactions

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

Figure 6.
Figure 6.

3DPredictor accurately reconstructs genome organization of novel cell types. (A) Example of mouse NPC Hi-C contact map derived from experimental data (above diagonal) or obtained using 3DPredictor trained on hepatocyte contacts and provided with epigenetic data relevant for NPC. (BF) SCC (B), Pearson's correlation (C), MRE (D), MSE (E), or MAE (F) measurements of 3DPredictor accuracy for training and validation on the same (green and purple lines) or different (red line) cell types.

This Article

  1. Genome Res. 30: 72-84

Preprint Server