Single-molecule long-read sequencing reveals the chromatin basis of gene expression

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

Figure 3.
Figure 3.

Performance evaluation of MeSMLR-seq on bulk-level nucleosome occupancy and single-molecule long-range phasing of nucleosomes. (A) Correlation of nucleosome occupancy profiles generated by MeSMLR-seq and MNase-seq. For MeSMLR-seq, the molecules that were aligned to forward (fwd) and reverse (rev) genomic strands were analyzed separately. (B) Nucleosome occupancy profiles at the bulk-cell level provided by MeSMLR-seq and MNase-seq. (C) Overlap of nucleosomes detected by MeSMLR-seq and MNase-seq at the bulk-cell level. (D) Number of nucleosomes phased at single sequencing molecules of MeSMLR-seq data under 2% glucose condition. (E) Detection and phasing of nucleosomes at the single-molecule level by NP-SMLR. Each gray line represents a molecule. Green oval represents nucleosome.

This Article

  1. Genome Res. 29: 1329-1342

Preprint Server