The C. elegans embryonic transcriptome with tissue, time, and alternative splicing resolution

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

Figure 6.
Figure 6.

Regulation of DE genes by transcription factors. Transcription factors are both more highly associated with DE genes in tissues (yellow) or significantly less associated with DE genes in a tissue (magenta) than by a random sampling of ChIP-seq peaks. Tissue time points marked in gray indicate no significantly increased or decreased presence of transcription factor binding sites with a P-value cutoff of 0.01. This heatmap displays −log(P-values) for each transcription factor by tissue/time for transcription factors enriched in the set of DE genes. If a transcription factor is depleted in the set of DE genes, then log(P-value) is displayed, making the values less than zero. Any transcription factor that did not achieve significance in any tissue/time (P-values all >0.01), either enriched or depleted, was not placed into the heatmap. Y55A3AM.14 is abbreviated as “Y55.”

This Article

  1. Genome Res. 29: 1036-1045

Preprint Server